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Sophie AYCIRIEX

Enseignant-chercheur

Numéro ORCID : 0000-0003-4813-5900


423 565 (Standard + 33 [0]437 423 535)
B2B05

Rattachements

Analyses biologiques par spectrométrie de masse

IHU - SPATIAL MULTI-OMICS

Publications (source HAL)

Articles dans une revue (34 documents )

  • Thomas Alexandre Brunet, Yohann Clément, Valentina Calabrese, Jérôme Lemoine, Olivier Geffard, et al.. Concomitant investigation of crustacean amphipods lipidome and metabolome during the molting cycle by Zeno SWATH data-independent acquisition coupled with electron activated dissociation and machine learning. Analytica Chimica Acta, 2024, 1304, pp.342533. ?10.1016/j.aca.2024.342533?. ?hal-04535105?
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  • Tingting Fu, Valentina Calabrese, Anabelle Espeyte, Sarah Bancel, Hervé Quéau, et al.. ToF-SIMS imaging shows specific lipophilic vitamin alterations in chronic reprotoxicity caused by the emerging contaminant Pravastatin in Gammarus fossarum.. Aquatic Toxicology, 2024, pp.106935. ?10.1016/j.aquatox.2024.106935?. ?hal-04565127?
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  • Valentina Calabrese, Thomas Alexandre Brunet, Davide Degli-Esposti, Arnaud Chaumot, Olivier Geffard, et al.. Electron-activated dissociation (EAD) for the complementary annotation of metabolites and lipids through data-dependent acquisition analysis and feature-based molecular networking, applied to the sentinel amphipod Gammarus fossarum. Analytical and Bioanalytical Chemistry, 2024, ?10.1007/s00216-024-05232-w?. ?hal-04507595?
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  • Mukesh Kumar, Canan Has, Khanh Lam-Kamath, Sophie Ayciriex, Deepshe Dewett, et al.. Lipidome Unsaturation Affects the Morphology and Proteome of the Drosophila Eye. Journal of Proteome Research, 2024, ?10.1021/acs.jproteome.3c00570?. ?hal-04519027?
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  • Guillaume Rossignol, Xavier Muller, Thomas Alexandre Brunet, Valeska Bidault, Valerie Hervieu, et al.. Comprehensive bile acid pool analysis during ex-vivo liver perfusion in a porcine model of ischemia-reperfusion injury. Scientific Reports, 2024, 14 (1), pp.2384. ?10.1038/s41598-024-52504-7?. ?hal-04425302?
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  • Patricia Laquel, Sophie Ayciriex, François Doignon, Nadine Camougrand, Louise Fougère, et al.. Mlg1, a yeast acyltransferase located in ER membranes associated with mitochondria ( MAMs ), is involved in de novo synthesis and remodelling of phospholipids. FEBS Journal, In press, ?10.1111/febs.17068?. ?hal-04431763?
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  • Vijaykumar Patra, Natalie Bordag, Yohann Clément, Harald Köfeler, Jean-Francois Nicolas, et al.. Ultraviolet exposure regulates skin metabolome based on the microbiome. Scientific Reports, 2023, 13 (1), pp.7207. ?10.1038/s41598-023-34073-3?. ?hal-04091111?
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  • Thomas Alexandre Brunet, Sophie Ayciriex, Delphine Arquier, Jérôme Lemoine, Jérôme Randon, et al.. Scout triggered multiple reaction monitoring mass spectrometry for the rapid transfer of large multiplexed targeted methods in metabolomics.. Journal of Chromatography B - Analytical Technologies in the Biomedical and Life Sciences, 2023, 1228, pp.123849. ?10.1016/j.jchromb.2023.123849?. ?hal-04216213?
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  • Julien Faugere, Thomas Alexandre Brunet, Yohann Clément, Anabelle Espeyte, Olivier Geffard, et al.. Development of a multi-omics extraction method for ecotoxicology: investigation of the reproductive cycle of Gammarus fossarum. Talanta, 2023, 253, pp.123806. ?10.1016/j.talanta.2022.123806?. ?hal-03773623?
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  • Valentina Calabrese, Arnaud Salvador, Yohann Clément, Thomas Alexandre Brunet, Anabelle Espeyte, et al.. Challenges and perspectives in MS-based omics approaches for ecotoxicology studies: An insight on Gammarids sentinel amphipods. Frontiers in Analytical Science, 2023, 3, pp.1118494. ?10.3389/frans.2023.1118494?. ?hal-03986050?
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  • Sophie Ayciriex. Meet up‐and‐coming analytical scientists – Sophie Ayciriex. Analytical Science Advances, 2022, ?10.1002/ansa.202200043?. ?hal-03893334?
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  • Aurélien Scalabre, Yohann Clément, Florence Guillière, Sophie Ayciriex, Ségolène Gaillard, et al.. Early detection of ureteropelvic junction obstruction in neonates with prenatal diagnosis of renal pelvis dilatation using 1H NMR urinary metabolomics. Scientific Reports, 2022, 12 (1), pp.13406. ?10.1038/s41598-022-17664-4?. ?hal-03745903?
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  • Mukesh Kumar, Canan Has, Khanh Lam-Kamath, Sophie Ayciriex, Deepshe Dewett, et al.. Vitamin A Deficiency Alters the Phototransduction Machinery and Distinct Non-Vision-Specific Pathways in the Drosophila Eye Proteome. Biomolecules, 2022, 12 (8), pp.1083. ?10.3390/biom12081083?. ?hal-03751366?
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  • Kyle Thompson, Lucas Bianchi, Francesca Rastelli, Florence Piron-Prunier, Sophie Ayciriex, et al.. Biallelic variants in TAMM41 are associated with low muscle cardiolipin levels, leading to neonatal mitochondrial disease. Human Genetics and Genomics Advances, 2022, 3 (2), pp.100097. ?10.1016/j.xhgg.2022.100097?. ?hal-03675447?
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  • Tingting Fu, Oskar Knittelfelder, Yohann Clément, Eric Testet, Nicolas Elie, et al.. Shotgun lipidomics and mass spectrometry imaging unveil diversity and dynamics in Gammarus fossarum lipid composition. iScience, 2021, 24 (2), pp.1-44. ?10.1016/j.isci.2021.102115?. ?hal-03134038?
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  • Ivano Di Meo, Chiara Cavestro, Silvia Pedretti, Tingting Fu, Simona Ligorio, et al.. Neuronal Ablation of CoA Synthase Causes Motor Deficits, Iron Dyshomeostasis, and Mitochondrial Dysfunctions in a CoPAN Mouse Model. International Journal of Molecular Sciences, 2020, 21 (24), pp.9707. ?10.3390/ijms21249707?. ?hal-03116877?
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  • Tingting Fu, Janina Oetjen, Manuel Chapelle, Alexandre Verdu, Matthias Szesny, et al.. In situ isobaric lipid mapping by MALDI-ion mobility separation-mass spectrometry imaging. Journal of Mass Spectrometry, 2020, 55 (9), pp.e4531. ?10.1002/jms.4531?. ?hal-03113280?
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  • Julien Faugère, Duarte Gouveia, Sophie Ayciriex, Arnaud Chaumot, Christine Almunia, et al.. High-multiplexed monitoring of protein biomarkers in the sentinel Gammarus fossarum by targeted scout-MRM assay, a new vision for ecotoxicoproteomics. Journal of Proteomics, 2020, 226, pp.103901. ?10.1016/j.jprot.2020.103901?. ?hal-02903090?
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  • Arnaud Salvador, Romain Carrière, Sophie Ayciriex, Christelle Margoum, Yves Leblanc, et al.. Scout-multiple reaction monitoring: A liquid chromatography tandem mass spectrometry approach for multi-residue pesticide analysis without time scheduling. Journal of Chromatography A, 2020, 1621, pp.461046. ?10.1016/j.chroma.2020.461046?. ?hal-02771252?
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  • Sophie Ayciriex, Romain Carrière, Chloé Bardet, Yves J. C. Le Blanc, Arnaud Salvador, et al.. Streamlined Development of Targeted Mass Spectrometry‐Based Method Combining Scout‐MRM and a Web‐Based Tool Indexed with Scout Peptides. Proteomics, 2020, pp.1900254. ?10.1002/pmic.201900254?. ?hal-02436928?
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  • Aurore Charnot, Duarte Gouveia, Sophie Ayciriex, Jérôme Lemoine, J. Armengaud, et al.. On-Line Solid Phase Extraction Liquid Chromatography-Mass Spectrometry Method for Multiplexed Proteins Quantitation in an Ecotoxicology Test Specie: Gammarus fossarum. Journal of Applied Bioanalysis, 2018, 4 (3), pp.81-101. ?10.17145/jab.18.012?. ?hal-01860702?
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  • Sophie Ayciriex, Fathia Djelti, Sandro Alves, Anne Regazzetti, Mathieu Gaudin, et al.. Neuronal Cholesterol Accumulation Induced by Cyp46a1 Down-Regulation in Mouse Hippocampus Disrupts Brain Lipid Homeostasis. Frontiers in Molecular Neuroscience, 2017, 10, ?10.3389/fnmol.2017.00211?. ?hal-03220550?
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  • Blandine Rougemont, Sebastien B Gallo, Sophie Ayciriex, Romain Carrière, Hubert Hondermarck, et al.. Scout-MRM: Multiplexed Targeted Mass Spectrometry-Based Assay without Retention Time Scheduling Exemplified by Dickeya dadantii Proteomic Analysis during Plant Infection. Analytical Chemistry, 2017, 89 (3), pp.1421-1426 ?10.1021/acs.analchem.6b03201?. ?hal-01518912?
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  • Sophie Ayciriex, H. Gerber, M. Osuna, M. Chami, H. Stahlberg, et al.. The lipidome associated with the gamma-secretase complex is required for its integrity and activity. Biochemical Journal, 2016, 473 (3), pp.321 - 334. ?10.1042/BJ20150448?. ?hal-01779038?
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  • Sophie Ayciriex, Marie-Anne Burlot, Jérome Braudeau, Kristin Michaelsen-Preusse, Brigitte Potier, et al.. Cholesterol 24-hydroxylase defect is implicated in memory impairments associated with Alzheimer-like Tau pathology. Human Molecular Genetics, 2015, 24 (21), pp.5965 - 5976. ?10.1093/hmg/ddv268?. ?hal-01779042?
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  • Sophie Ayciriex, Fathia Djelti, Jérome Braudeau, Eloise Hudry, Marc Dhenain, et al.. CYP46A1 inhibition, brain cholesterol accumulation and neurodegeneration pave the way for Alzheimer’s disease. Brain - A Journal of Neurology , 2015, 138 (8), pp.2383 - 2398. ?10.1093/brain/awv166?. ?hal-01779044?
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  • Michael Habeck, Haim Haviv, Adriana Katz, Einat Kapri-Pardes, Sophie Ayciriex, et al.. Stimulation, Inhibition, or Stabilization of Na,K-ATPase Caused by Specific Lipid Interactions at Distinct Sites. Journal of Biological Chemistry, 2015, 290 (8), pp.4829 - 4842. ?10.1074/jbc.M114.611384?. ?hal-01779047?
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  • Jonathan Rodenfels, Oksana Lavrynenko, Sophie Ayciriex, Julio Sampaio, Maria Carvalho, et al.. Production of systemically circulating Hedgehog by the intestine couples nutrition to growth and development. Genes and Development, 2014, 28 (23), pp.2636 - 2651. ?10.1101/gad.249763.114?. ?hal-01779049?
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  • Mathieu Gaudin, Mai Panchal, Sophie Ayciriex, Erwan Werner, Alain Brunelle, et al.. Ultra performance liquid chromatography - mass spectrometry studies of formalin-induced alterations of human brain lipidome. Journal of Mass Spectrometry, 2014, 49 (10), pp.1035 - 1042. ?10.1002/jms.3424?. ?hal-01779050?
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  • Mai Panchal, Mathieu Gaudin, Adina Lazar, Elisa Salvati, Isabelle Rivals, et al.. Ceramides and sphingomyelinases in senile plaques. Neurobiology of Disease, 2014, 65, pp.193 - 201. ?10.1016/j.nbd.2014.01.010?. ?hal-01779051?
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  • Maï Panchal, Mathieu Gaudin, Adina Lazar, Elisa Salvati, Isabelle Rivals, et al.. Ceramides and sphingomyelinases in senile plaques. Neurobiology of Disease, 2014, 65, pp.193-201. ?10.1016/j.nbd.2014.01.010?. ?hal-03572624?
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  • Corinne Bure, Sophie Ayciriex, Eric Testet, Jean-Marie Schmitter. A single run LC-MS/MS method for phospholipidomics. Analytical and Bioanalytical Chemistry, 2013, 405 (1), pp.203 - 213. ?10.1007/s00216-012-6466-9?. ?hal-01779053?
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  • Sophie Ayciriex, Marina Le Guédard, Nadine Camougrand, Gisèle Velours, Mario Schoene, et al.. YPR139c/LOA1 encodes a novel lysophosphatidic acid acyltransferase associated with lipid droplets and involved in TAG homeostasis. Molecular Biology of the Cell, 2012, 23 (2), pp.233-246. ?10.1091/mbc.E11-07-0650?. ?hal-02110244?
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  • Marina Le Guédard, Jean‐jacques Bessoule, Valérie Boyer, Sophie Ayciriex, Gisèle Velours, et al.. PSI1 is responsible for the stearic acid enrichment that is characteristic of phosphatidylinositol in yeast. FEBS Journal, 2009, 276 (21), pp.6412-6424. ?10.1111/j.1742-4658.2009.07355.x?. ?hal-04535112?
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